STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78799.1Hypothetical protein. (408 aa)    
Predicted Functional Partners:
KXB78800.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.92.
 
    0.953
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
   
  0.786
KXB77494.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 1.3e-17 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
  
 
 0.621
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.604
KXB76120.1
Hypothetical protein; KEGG: vpo:Kpol_1013p52 0.00030 hypothetical protein; K15562 serine/threonine-protein kinase BUR1; Psort location: OuterMembrane, score: 9.49.
  
    0.596
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.592
KXB80391.1
Peptidase C1-like family protein; KEGG: cpi:Cpin_0714 2.7e-41 peptidase C1B bleomycin hydrolase; K01372 bleomycin hydrolase; Psort location: Cytoplasmic, score: 8.96.
  
     0.552
KXB80834.1
PepSY domain protein; KEGG: sdl:Sdel_1565 0.00052 PepSY-associated TM helix domain-containing protein; K00380 sulfite reductase (NADPH) flavoprotein alpha-component; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
  0.522
KXB79166.1
KEGG: pdn:HMPREF9137_1471 1.2e-157 putative 3-deoxy-7-phosphoheptulonate synthase; K04516 chorismate mutase; Psort location: Cytoplasmic, score: 9.97.
    
  0.493
KXB78437.1
KEGG: pru:PRU_0556 3.3e-121 C1 family peptidase; Belongs to the peptidase C1 family.
  
     0.483
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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