Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB78800.1TonB-dependent receptor; Psort location: OuterMembrane, score: 9.92. (658 aa)    
Predicted Functional Partners:
KXB78799.1
Hypothetical protein.
 
   0.979
KXB80132.1
TonB-dependent receptor; KEGG: hip:CGSHiEE_01810 2.4e-07 bcp; TonB K03832; Psort location: Periplasmic, score: 9.83.
 
 
 
 0.568
KXB80391.1
Peptidase C1-like family protein; KEGG: cpi:Cpin_0714 2.7e-41 peptidase C1B bleomycin hydrolase; K01372 bleomycin hydrolase; Psort location: Cytoplasmic, score: 8.96.
  
     0.514
KXB76120.1
Hypothetical protein; KEGG: vpo:Kpol_1013p52 0.00030 hypothetical protein; K15562 serine/threonine-protein kinase BUR1; Psort location: OuterMembrane, score: 9.49.
  
     0.497
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
   
 
 0.495
KXB78993.1
TonB-dependent receptor.
   
 
 0.494
KXB77312.1
Hypothetical protein.
  
 
   0.456
KXB78437.1
KEGG: pru:PRU_0556 3.3e-121 C1 family peptidase; Belongs to the peptidase C1 family.
  
     0.448
KXB79134.1
KEGG: pru:PRU_0556 3.4e-160 C1 family peptidase; Belongs to the peptidase C1 family.
  
     0.447
KXB77624.1
Hypothetical protein.
  
 
   0.439
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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