Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB78747.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (346 aa)    
Predicted Functional Partners:
KXB78748.1
Hypothetical protein; KEGG: pyn:PNA2_0233 2.4e-06 phosphate import ATP-binding protein pstB; K02036 phosphate transport system ATP-binding protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.951
KXB74212.1
Hypothetical protein.
  
     0.768
KXB74210.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.747
KXB79138.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.745
KXB79959.1
Hypothetical protein; KEGG: pdn:HMPREF9137_0079 1.2e-299 hypothetical protein; K03770 peptidyl-prolyl cis-trans isomerase D; Psort location: OuterMembrane, score: 9.49.
  
     0.734
KXB80394.1
PAP2 family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.718
KXB75710.1
Hypothetical protein.
  
     0.718
KXB74211.1
Hypothetical protein; KEGG: dmu:Desmu_1037 0.0084 peptidase S26B, signal peptidase; K13280 signal peptidase, endoplasmic reticulum-type; Psort location: Cytoplasmic, score: 8.96.
  
     0.709
KXB74268.1
Gliding motility-associated lipoprotein GldH.
  
     0.698
KXB80600.1
Hypothetical protein; KEGG: pyo:PY00139 0.00064 erythrocyte membrane protein; K09561 STIP1 homology and U-box containing protein 1; Psort location: OuterMembrane, score: 9.49.
  
     0.655
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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