STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78752.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (129 aa)    
Predicted Functional Partners:
KXB78751.1
Transposase; KEGG: efc:EFAU004_01884 0.0010 IS1476, transposase; Psort location: Cytoplasmic, score: 8.96.
 
     0.886
KXB82162.1
Transposase; Psort location: Cytoplasmic, score: 8.96.
 
     0.786
KXB75070.1
Hypothetical protein.
  
     0.508
KXB76628.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.498
KXB76629.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.486
KXB78753.1
Hypothetical protein.
       0.485
KXB74751.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.484
KXB74750.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.471
der
Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
       0.470
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.