Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXB78760.1Hypothetical protein; KEGG: rsa:RSal33209_3414 0.0024 N-acetylglucosamine kinase; Psort location: Cytoplasmic, score: 8.96. (295 aa)    
Predicted Functional Partners:
KXB74189.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.758
KXB74190.1
Hypothetical protein; KEGG: pmz:HMPREF0659_A5471 9.1e-183 tpiA; triose-phosphate isomerase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.682
KXB80419.1
uroporphyrinogen-III synthase; KEGG: pdn:HMPREF9137_0433 2.5e-107 hemD; uroporphyrinogen-III synthase K01719; Psort location: Cytoplasmic, score: 8.96.
  
     0.680
KXB78759.1
Transporter, small conductance mechanosensitive ion channel MscS family protein; KEGG: mla:Mlab_1701 5.8e-14 phosphoglycerate mutase K01834; Psort location: CytoplasmicMembrane, score: 10.00.
       0.638
KXB78961.1
Outer membrane protein; KEGG: hip:CGSHiEE_07435 4.4e-06 leuS; leucyl-tRNA synthetase K06142.
  
     0.633
KXB77641.1
Hypothetical protein; KEGG: zin:ZICARI_156 0.00066 tilS; putative tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase; Psort location: OuterMembrane, score: 9.49.
  
     0.627
KXB74244.1
Type I restriction enzyme HsdR protein; KEGG: nth:Nther_0809 3.8e-05 LexA repressor; Psort location: Cytoplasmic, score: 8.96.
  
     0.616
KXB80146.1
Hypothetical protein.
  
     0.613
KXB75337.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.608
folD
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
    
   0.603
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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