Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB78766.1Putative epimerase/dehydratase WbiI; KEGG: ccm:Ccan_23400 9.9e-122 capsular polysaccharide biosynthesis protein capD; Psort location: CytoplasmicMembrane, score: 10.00. (649 aa)    
Predicted Functional Partners:
KXB77800.1
Chain length determinant protein; KEGG: bsa:Bacsa_0238 4.6e-156 capsular exopolysaccharide family protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.947
KXB80402.1
KEGG: gfo:GFO_1986 2.1e-89 ArnB-like DegT/DnrJ/EryC1/StrS family aminotransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.943
KXB77788.1
KEGG: pmz:HMPREF0659_A5895 3.3e-75 bacterial sugar transferase; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
 0.841
KXB74254.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein; KEGG: psp:PSPPH_3420 4.2e-114 aminotransferase K01726; Psort location: Cytoplasmic, score: 9.97; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.813
KXB79122.1
KEGG: pmz:HMPREF0659_A5505 2.8e-124 UDP-N-acetylglucosamine 2-epimerase K01791; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.806
KXB81935.1
Polysaccharide biosynthesis/export protein.
  
 
 0.774
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.743
KXB78053.1
KEGG: pmz:HMPREF0659_A5908 2.8e-188 nucleotide sugar dehydrogenase; K02474 UDP-N-acetyl-D-galactosamine dehydrogenase; Psort location: Cytoplasmic, score: 9.97; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.710
KXB78796.1
KEGG: pru:PRU_1376 5.1e-141 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; K00971 mannose-1-phosphate guanylyltransferase.
  
 
 0.702
KXB77792.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.652
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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