STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bukButyrate kinase; KEGG: pmz:HMPREF0659_A5762 8.5e-132 buk; butyrate kinase K00929; Psort location: Cytoplasmic, score: 9.97; Belongs to the acetokinase family. (354 aa)    
Predicted Functional Partners:
KXB78768.1
KEGG: pmz:HMPREF0659_A5763 1.0e-96 putative phosphate butyryltransferase; K00634 phosphate butyryltransferase; Psort location: Cytoplasmic, score: 8.96.
 
 0.997
KXB77817.1
KEGG: pmz:HMPREF0659_A6214 2.3e-152 pta; phosphate acetyltransferase K00625; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.839
sucC
succinate-CoA ligase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
       0.776
sucD
succinate-CoA ligase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
       0.742
KXB74137.1
Malic enzyme, NAD binding domain protein; KEGG: pmz:HMPREF0659_A6863 1.2e-187 malate dehydrogenase (oxaloacetate-decarboxylating) K00029; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.733
KXB78767.1
Hypothetical protein; KEGG: fnu:FN1512 3.1e-05 phophatidylinositol-4-phosphate 5-kinase.
       0.683
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
     
 0.665
KXB77322.1
Glutamate dehydrogenase, NAD-specific; KEGG: pit:PIN17_A1094 9.6e-227 gdh; glutamate dehydrogenase K00262; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 0.631
KXB78766.1
Putative epimerase/dehydratase WbiI; KEGG: ccm:Ccan_23400 9.9e-122 capsular polysaccharide biosynthesis protein capD; Psort location: CytoplasmicMembrane, score: 10.00.
       0.403
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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