STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78779.1Toxin-antitoxin system, toxin component, Fic family; KEGG: pdn:HMPREF9137_0457 4.3e-25 purC_2; phosphoribosylaminoimidazole succinocarboxamide synthase; Psort location: Cytoplasmic, score: 8.96. (335 aa)    
Predicted Functional Partners:
KXB78778.1
DNA (cytosine-5-)-methyltransferase; KEGG: bfs:BF1120 7.0e-176 modification enzyme of type III restriction-modification system; K00571 site-specific DNA-methyltransferase (adenine-specific); Psort location: Cytoplasmic, score: 8.96.
       0.776
KXB78780.1
Type III restriction enzyme, res subunit; KEGG: pah:Poras_0991 0. type III site-specific deoxyribonuclease; Psort location: Cytoplasmic, score: 8.96.
       0.776
KXB78781.1
Hypothetical protein.
       0.511
KXB78904.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.468
KXB78777.1
Type III restriction enzyme, res subunit; KEGG: mph:MLP_35860 2.0e-171 putative helicase.
       0.447
KXB78776.1
DNA-binding helix-turn-helix protein.
       0.444
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.