STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78553.1Maf-like protein; KEGG: apb:SAR116_1315 3.8e-10 Nucleotide-binding protein implicated in inhibition of septum formation K06287; Psort location: Cytoplasmic, score: 9.26; Belongs to the Maf family. (171 aa)    
Predicted Functional Partners:
KXB82127.1
Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
    0.746
KXB78554.1
Putative 3-deoxy-manno-octulosonate-8-phosphatase; KEGG: pit:PIN17_0317 8.3e-70 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270; Psort location: Cytoplasmic, score: 9.97.
       0.676
KXB78555.1
Hypothetical protein; KEGG: ccm:Ccan_10160 1.0e-39 putative Pyrroline-5-carboxylate reductase; Psort location: Cytoplasmic, score: 8.96.
       0.676
KXB78137.1
KEGG: apb:SAR116_0709 0.00031 cell shape-determining protein K03570.
  
  
 0.612
kdsB
3-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
       0.600
KXB77474.1
Hypothetical protein; KEGG: pfe:PSF113_5769 7.1e-25 yicC; protein YicC; Psort location: Cytoplasmic, score: 9.97.
 
     0.405
rlmH
Putative rRNA large subunit m3Psi methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
       0.405
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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