Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB78437.1KEGG: pru:PRU_0556 3.3e-121 C1 family peptidase; Belongs to the peptidase C1 family. (399 aa)    
Predicted Functional Partners:
KXB80274.1
Putative NAD(+) diphosphatase; KEGG: pmz:HMPREF0659_A5588 5.2e-100 hydrolase, NUDIX family; K03426 NAD+ diphosphatase; Psort location: Cytoplasmic, score: 8.96.
    
   0.603
KXB75716.1
Hydrolase, NUDIX family; KEGG: pmz:HMPREF0659_A5133 9.3e-55 mutator MutT protein; Psort location: Cytoplasmic, score: 8.96.
    
   0.603
KXB80403.1
Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
     0.591
KXB78741.1
KEGG: pmz:HMPREF0659_A6065 2.6e-185 putative aminopeptidase E; K01372 bleomycin hydrolase; Belongs to the peptidase C1 family.
  
  
 
0.560
KXB78799.1
Hypothetical protein.
  
     0.483
KXB78800.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.92.
  
     0.448
KXB74250.1
KEGG: pmz:HMPREF0659_A6994 0. peptidase, S9A/B/C family, catalytic domain protein.
  
     0.447
KXB74124.1
Peptidase, C69 family; KEGG: vfu:vfu_B00471 2.0e-25 dipeptidase; K08659 dipeptidase; Psort location: Periplasmic, score: 9.84.
 
     0.435
KXB78438.1
Phosphatidylinositol-specific phospholipase C, X domain protein; KEGG: bfr:BF1750 5.1e-30 1-phosphatidylinositol phosphodiesterase; K01771 1-phosphatidylinositol phosphodiesterase.
       0.409
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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