STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78441.1Transcriptional regulatory protein RprY; KEGG: ava:Ava_1878 4.4e-32 two component transcriptional regulator K11329; Psort location: Cytoplasmic, score: 9.97. (235 aa)    
Predicted Functional Partners:
KXB78440.1
KEGG: pdn:HMPREF9137_0202 1.0e-229 ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR; Psort location: CytoplasmicMembrane, score: 7.88.
 0.989
KXB78018.1
Respiratory-chain NADH dehydrogenase, subunit; KEGG: pdn:HMPREF9137_1116 8.1e-246 hypothetical protein; K13378 NADH-quinone oxidoreductase subunit C/D; Psort location: Cytoplasmic, score: 9.12.
   
   0.974
KXB80817.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bvu:BVU_4096 1.2e-95 two-component system sensor histidine kinase; K02484 two-component system, OmpR family, sensor kinase; Psort location: CytoplasmicMembrane, score: 7.88.
 0.952
KXB77223.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bfr:BF0210 3.3e-146 two-component system sensor histidine kinase; K00936; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.924
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
    
 
 0.767
nuoA
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.
    
   0.686
nuoB
NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
    
   0.686
KXB78021.1
NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
    
   0.686
KXB79160.1
KEGG: pmz:HMPREF0659_A5967 7.2e-32 4Fe-4S binding domain protein; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta.
    
   0.669
KXB78020.1
KEGG: pdn:HMPREF9137_1118 7.4e-85 4Fe-4S binding protein; K00338 NADH-quinone oxidoreductase subunit I; Psort location: Cytoplasmic, score: 9.12.
    
   0.669
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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