Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB78455.1ATPase family protein; KEGG: pmz:HMPREF0659_A6831 8.4e-148 ATPase, AAA family; K03924 MoxR-like ATPase; Psort location: Cytoplasmic, score: 9.97. (331 aa)    
Predicted Functional Partners:
KXB78456.1
Hypothetical protein; KEGG: cnc:CNE_2c16150 2.5e-36 MoxR-like ATPase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.962
KXB78458.1
KEGG: fna:OOM_0180 4.5e-30 IMP dehydrogenase/GMP reductase:von Willebrand factor, type A K07114; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.952
KXB78459.1
KEGG: fna:OOM_0180 1.2e-21 IMP dehydrogenase/GMP reductase:von Willebrand factor, type A K07114; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.939
KXB78457.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.16.
 
    0.822
KXB78460.1
Tetratricopeptide repeat protein; KEGG: sgn:SGRA_3959 0.00072 glycosyl transferase family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.723
KXB78453.1
DNA-binding protein HU; KEGG: apb:SAR116_0173 1.3e-09 integration host factor subunit alpha K04764; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial histone-like protein family.
       0.596
KXB78461.1
PAP2 family protein; KEGG: ccm:Ccan_06070 6.4e-24 Dolicholpyrophosphatase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.546
rimO
Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
       0.543
KXB78454.1
DNA-binding protein HU; KEGG: phu:Phum_PHUM249060 0.00012 hypothetical protein; K14437 chromodomain-helicase-DNA-binding protein 7; Psort location: Cytoplasmic, score: 8.96; Belongs to the bacterial histone-like protein family.
       0.521
KXB78462.1
Putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
       0.515
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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