Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB78457.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.16. (355 aa)    
Predicted Functional Partners:
KXB78456.1
Hypothetical protein; KEGG: cnc:CNE_2c16150 2.5e-36 MoxR-like ATPase; Psort location: Cytoplasmic, score: 9.97.
 
    0.932
KXB78460.1
Tetratricopeptide repeat protein; KEGG: sgn:SGRA_3959 0.00072 glycosyl transferase family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.908
KXB78459.1
KEGG: fna:OOM_0180 1.2e-21 IMP dehydrogenase/GMP reductase:von Willebrand factor, type A K07114; Psort location: CytoplasmicMembrane, score: 9.99.
 
   
 0.890
KXB78458.1
KEGG: fna:OOM_0180 4.5e-30 IMP dehydrogenase/GMP reductase:von Willebrand factor, type A K07114; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.889
KXB78455.1
ATPase family protein; KEGG: pmz:HMPREF0659_A6831 8.4e-148 ATPase, AAA family; K03924 MoxR-like ATPase; Psort location: Cytoplasmic, score: 9.97.
 
    0.822
KXB77460.1
Hypothetical protein.
  
     0.602
KXB78568.1
S4 domain protein; KEGG: mct:MCR_0729 7.4e-14 heat shock protein 15 K04762; Psort location: Cytoplasmic, score: 9.97.
  
    0.583
KXB78461.1
PAP2 family protein; KEGG: ccm:Ccan_06070 6.4e-24 Dolicholpyrophosphatase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.578
KXB79941.1
Signal peptide protein, YSIRK family; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.575
KXB78462.1
Putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
       0.557
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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