STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78458.1KEGG: fna:OOM_0180 4.5e-30 IMP dehydrogenase/GMP reductase:von Willebrand factor, type A K07114; Psort location: CytoplasmicMembrane, score: 10.00. (318 aa)    
Predicted Functional Partners:
KXB78456.1
Hypothetical protein; KEGG: cnc:CNE_2c16150 2.5e-36 MoxR-like ATPase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.966
KXB78455.1
ATPase family protein; KEGG: pmz:HMPREF0659_A6831 8.4e-148 ATPase, AAA family; K03924 MoxR-like ATPase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.963
KXB78460.1
Tetratricopeptide repeat protein; KEGG: sgn:SGRA_3959 0.00072 glycosyl transferase family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.914
KXB78457.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.16.
 
   
 0.908
KXB78459.1
KEGG: fna:OOM_0180 1.2e-21 IMP dehydrogenase/GMP reductase:von Willebrand factor, type A K07114; Psort location: CytoplasmicMembrane, score: 9.99.
 
   
0.846
KXB78461.1
PAP2 family protein; KEGG: ccm:Ccan_06070 6.4e-24 Dolicholpyrophosphatase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.651
KXB78462.1
Putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
       0.632
KXB77366.1
Methyltransferase domain protein; KEGG: pel:SAR11G3_00145 2.4e-15 3-demethylubiquinone-9 3-methyltransferase K00568; Psort location: Cytoplasmic, score: 8.96.
   
 0.624
KXB78463.1
Hypothetical protein; KEGG: ctc:CTC01755 0.0078 zinc protease K01422; Psort location: Cytoplasmic, score: 8.96.
       0.603
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
    0.589
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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