close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78467.1Transporter, major facilitator family protein; KEGG: rcu:RCOM_0229730 2.3e-65 beta-glucosidase, putative; Psort location: CytoplasmicMembrane, score: 10.00. (423 aa)    
Predicted Functional Partners:
KXB77486.1
Transporter, major facilitator family protein; KEGG: eci:UTI89_C0457 2.4e-17 ampG; muropeptide transporter K08218; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.754
KXB74338.1
Hypothetical protein; KEGG: rcu:RCOM_0229730 4.7e-29 beta-glucosidase, putative; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 
0.687
KXB78466.1
Glycosyl hydrolase family 20, catalytic domain protein; KEGG: pru:PRU_1156 3.0e-168 family 20 glycosyl hydrolase; K12373 hexosaminidase; Psort location: Periplasmic, score: 9.76.
       0.681
KXB78134.1
Hypothetical protein; KEGG: rcu:RCOM_0229730 1.8e-53 beta-glucosidase, putative; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 
0.675
KXB78468.1
Hypothetical protein; KEGG: pmz:HMPREF0659_A6969 9.2e-174 F5/8 type C domain protein; K01206 alpha-L-fucosidase.
       0.560
KXB80408.1
KEGG: pmz:HMPREF0659_A6972 1.2e-281 glucosamine-6-phosphate deaminase-like protein K02564; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.537
KXB74335.1
Glycosyltransferase, group 2 family protein; KEGG: sat:SYN_00250 6.0e-99 glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96.
 
     0.520
KXB74336.1
Hypothetical protein; KEGG: ddi:DDB_G0282525 0.00028 hypothetical protein; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
     0.501
KXB81740.1
Hypothetical protein.
  
     0.499
KXB79605.1
Hypothetical protein.
 
     0.476
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.