STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78468.1Hypothetical protein; KEGG: pmz:HMPREF0659_A6969 9.2e-174 F5/8 type C domain protein; K01206 alpha-L-fucosidase. (482 aa)    
Predicted Functional Partners:
KXB75718.1
Hypothetical protein; KEGG: bhl:Bache_2923 9.6e-266 alpha-L-fucosidase.
 
  0.905
KXB78466.1
Glycosyl hydrolase family 20, catalytic domain protein; KEGG: pru:PRU_1156 3.0e-168 family 20 glycosyl hydrolase; K12373 hexosaminidase; Psort location: Periplasmic, score: 9.76.
 
   
 0.711
KXB78742.1
KEGG: pmz:HMPREF0659_A6062 0. beta galactosidase small chain; K01190 beta-galactosidase.
 
   
 0.667
KXB78467.1
Transporter, major facilitator family protein; KEGG: rcu:RCOM_0229730 2.3e-65 beta-glucosidase, putative; Psort location: CytoplasmicMembrane, score: 10.00.
       0.560
KXB79601.1
BNR/Asp-box repeat protein; KEGG: bth:BT_0455 1.4e-184 sialidase; K01186 sialidase-1; Psort location: Periplasmic, score: 9.44.
 
   
 0.558
KXB78791.1
Alpha-galactosidase; KEGG: bfs:BF1418 1.5e-70 alpha-galactosidase K07407.
 
  
 0.558
KXB78096.1
Hypothetical protein; KEGG: rba:RB10144 4.1e-29 endo-1,4-beta-xylanase B.
 
  
  0.555
KXB75717.1
Hypothetical protein; KEGG: pit:PIN17_A0403 8.0e-104 peptidase, S9A/B/C family, catalytic domain protein.
 
  
  0.543
KXB79602.1
Glycosyl hydrolase family 20, catalytic domain protein; KEGG: pmz:HMPREF0659_A6443 1.7e-206 beta-L-N-acetylhexosaminidase family protein; K12373 hexosaminidase; Psort location: Periplasmic, score: 9.76.
 
   
 0.518
KXB80830.1
KEGG: efc:EFAU004_02559 5.4e-114 alpha-1,2-mannosidase.
 
     0.410
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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