STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78470.1Hypothetical protein. (389 aa)    
Predicted Functional Partners:
KXB78472.1
Hypothetical protein; Psort location: Periplasmic, score: 9.83.
 
 
   0.914
KXB75599.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 7.2e-06 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 9.52.
 
 
   0.863
KXB78473.1
TonB-dependent receptor; KEGG: ccv:CCV52592_1977 2.2e-10 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 9.52.
 
     0.843
KXB78469.1
Hypothetical protein.
       0.816
KXB78242.1
KEGG: pdn:HMPREF9137_0969 0. peptidase, S8/S53 family; Psort location: Extracellular, score: 9.72; Belongs to the peptidase S8 family.
 
 0.803
KXB75595.1
KEGG: bsa:Bacsa_0821 2.9e-33 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; Psort location: Extracellular, score: 9.78.
 
 
  0.802
KXB75598.1
Hypothetical protein.
 
 
   0.778
KXB78471.1
Hypothetical protein; KEGG: seu:SEQ_0432 0.00014 endoglycosidase (EndoS) K01227; Psort location: Extracellular, score: 9.78.
    
  0.772
KXB80596.1
Putative stage III sporulation protein E; KEGG: apb:SAR116_1808 5.5e-89 DNA segregation ATPase FtsK/SpoIIIE K03466; Psort location: CytoplasmicMembrane, score: 10.00.
    
 
 0.687
KXB75596.1
Hypothetical protein.
 
0.677
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.