Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB78471.1Hypothetical protein; KEGG: seu:SEQ_0432 0.00014 endoglycosidase (EndoS) K01227; Psort location: Extracellular, score: 9.78. (366 aa)    
Predicted Functional Partners:
KXB74994.1
KEGG: pdn:HMPREF9137_1209 0. glycosyltransferase group 2 family protein; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.794
KXB78470.1
Hypothetical protein.
    
  0.769
KXB78469.1
Hypothetical protein.
       0.706
KXB78438.1
Phosphatidylinositol-specific phospholipase C, X domain protein; KEGG: bfr:BF1750 5.1e-30 1-phosphatidylinositol phosphodiesterase; K01771 1-phosphatidylinositol phosphodiesterase.
   
 0.688
KXB76537.1
Phosphatidylinositol-specific phospholipase C, X domain protein; KEGG: bfr:BF1750 2.4e-27 1-phosphatidylinositol phosphodiesterase; K01771 1-phosphatidylinositol phosphodiesterase.
   
 0.688
KXB78472.1
Hypothetical protein; Psort location: Periplasmic, score: 9.83.
       0.680
KXB78473.1
TonB-dependent receptor; KEGG: ccv:CCV52592_1977 2.2e-10 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 9.52.
       0.510
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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