Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB78473.1TonB-dependent receptor; KEGG: ccv:CCV52592_1977 2.2e-10 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 9.52. (1036 aa)    
Predicted Functional Partners:
KXB78472.1
Hypothetical protein; Psort location: Periplasmic, score: 9.83.
 
   
 0.911
KXB78470.1
Hypothetical protein.
 
     0.847
KXB75598.1
Hypothetical protein.
 
   
 0.801
KXB78999.1
Hypothetical protein.
 
   
 0.720
KXB77624.1
Hypothetical protein.
 
   
 0.706
KXB75596.1
Hypothetical protein.
  
 
   0.706
KXB77312.1
Hypothetical protein.
 
   
 0.687
KXB77719.1
Hypothetical protein.
 
   
 0.681
KXB77718.1
Hypothetical protein.
  
     0.662
KXB75666.1
SusD family protein; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.645
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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