STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78473.1TonB-dependent receptor; KEGG: ccv:CCV52592_1977 2.2e-10 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 9.52. (1036 aa)    
Predicted Functional Partners:
KXB78472.1
Hypothetical protein; Psort location: Periplasmic, score: 9.83.
 
     0.908
KXB78470.1
Hypothetical protein.
 
     0.843
KXB75596.1
Hypothetical protein.
  
 
   0.808
KXB75598.1
Hypothetical protein.
     0.795
KXB78999.1
Hypothetical protein.
 
     0.719
KXB77624.1
Hypothetical protein.
 
     0.705
KXB77312.1
Hypothetical protein.
 
     0.686
KXB77719.1
Hypothetical protein.
 
     0.680
KXB80132.1
TonB-dependent receptor; KEGG: hip:CGSHiEE_01810 2.4e-07 bcp; TonB K03832; Psort location: Periplasmic, score: 9.83.
 
   0.666
KXB77718.1
Hypothetical protein.
  
     0.662
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.