STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78276.1Transporter, SSS family; KEGG: pfe:PSF113_4246 6.1e-05 actP2; actP protein K14393; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (477 aa)    
Predicted Functional Partners:
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
       0.718
KXB78278.1
Alpha-2-macroglobulin family protein.
       0.666
apt
Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.532
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
   
  
 0.532
KXB81982.1
Na+/H+ antiporter family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.530
KXB78760.1
Hypothetical protein; KEGG: rsa:RSal33209_3414 0.0024 N-acetylglucosamine kinase; Psort location: Cytoplasmic, score: 8.96.
 
     0.470
KXB77266.1
Sigma-54 interaction domain protein; KEGG: pfe:PSF113_0046 1.1e-65 algB; protein AlgB; Psort location: Cytoplasmic, score: 9.97.
    
 0.446
KXB74190.1
Hypothetical protein; KEGG: pmz:HMPREF0659_A5471 9.1e-183 tpiA; triose-phosphate isomerase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.439
KXB78298.1
KEGG: spe:Spro_1881 4.5e-39 amino acid/peptide transporter K03305; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.416
KXB74208.1
Cytochrome C biogenesis protein transmembrane region; KEGG: bsa:Bacsa_2272 1.0e-213 Protein-disulfide reductase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.404
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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