STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78281.1TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.93. (1086 aa)    
Predicted Functional Partners:
KXB78280.1
Cupin domain protein; KEGG: mhu:Mhun_2973 8.7e-05 CMP/dCMP deaminase, zinc-binding; K01485 cytosine deaminase; Psort location: Cytoplasmic, score: 8.96.
 
     0.788
KXB80132.1
TonB-dependent receptor; KEGG: hip:CGSHiEE_01810 2.4e-07 bcp; TonB K03832; Psort location: Periplasmic, score: 9.83.
 
 
 0.722
KXB78993.1
TonB-dependent receptor.
 
 
 0.672
KXB78284.1
KEGG: eci:UTI89_C3355 1.6e-98 nupG; transport of nucleosides, permease K03289; Psort location: CytoplasmicMembrane, score: 10.00.
       0.639
KXB80395.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.49.
  
     0.595
KXB74148.1
TonB-dependent receptor.
  
    0.563
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
 
 0.543
KXB74221.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 10.00.
  
    0.537
KXB78283.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.519
KXB81741.1
Hypothetical protein.
  
     0.492
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.