STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78283.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (184 aa)    
Predicted Functional Partners:
KXB78284.1
KEGG: eci:UTI89_C3355 1.6e-98 nupG; transport of nucleosides, permease K03289; Psort location: CytoplasmicMembrane, score: 10.00.
       0.849
KXB78282.1
RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.816
KXB78767.1
Hypothetical protein; KEGG: fnu:FN1512 3.1e-05 phophatidylinositol-4-phosphate 5-kinase.
  
     0.757
KXB78964.1
BNR/Asp-box repeat protein.
  
     0.743
KXB77795.1
Hypothetical protein; KEGG: taz:TREAZ_3063 5.3e-08 group 1 family glycosyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
     0.729
KXB78285.1
Hypothetical protein.
       0.725
KXB75706.1
HTH domain protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.715
KXB79594.1
Hypothetical protein.
  
     0.698
KXB75734.1
OstA-like protein.
 
     0.674
KXB78280.1
Cupin domain protein; KEGG: mhu:Mhun_2973 8.7e-05 CMP/dCMP deaminase, zinc-binding; K01485 cytosine deaminase; Psort location: Cytoplasmic, score: 8.96.
 
     0.658
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.