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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78284.1KEGG: eci:UTI89_C3355 1.6e-98 nupG; transport of nucleosides, permease K03289; Psort location: CytoplasmicMembrane, score: 10.00. (421 aa)    
Predicted Functional Partners:
KXB78283.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.849
KXB78282.1
RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.816
KXB78285.1
Hypothetical protein.
       0.725
KXB78281.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.93.
       0.639
KXB81388.1
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.512
KXB78286.1
Hypothetical protein.
       0.450
KXB78280.1
Cupin domain protein; KEGG: mhu:Mhun_2973 8.7e-05 CMP/dCMP deaminase, zinc-binding; K01485 cytosine deaminase; Psort location: Cytoplasmic, score: 8.96.
       0.404
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.