STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78256.1Endonuclease/exonuclease/phosphatase family protein; KEGG: cne:CNA05370 0.0045 phospholipase C; K01128; Psort location: CytoplasmicMembrane, score: 10.00. (366 aa)    
Predicted Functional Partners:
KXB75726.1
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.845
KXB78257.1
Peptidase, S54 family; KEGG: pmz:HMPREF0659_A6317 6.3e-120 peptidase, S54 family; Psort location: CytoplasmicMembrane, score: 10.00.
       0.789
secF
Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
     
 0.705
KXB77476.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.657
KXB77451.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.656
KXB77641.1
Hypothetical protein; KEGG: zin:ZICARI_156 0.00066 tilS; putative tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase; Psort location: OuterMembrane, score: 9.49.
  
     0.637
KXB78258.1
DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
       0.629
KXB78561.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.569
KXB81930.1
Hypothetical protein.
  
     0.558
KXB78278.1
Alpha-2-macroglobulin family protein.
  
     0.535
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.