STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78257.1Peptidase, S54 family; KEGG: pmz:HMPREF0659_A6317 6.3e-120 peptidase, S54 family; Psort location: CytoplasmicMembrane, score: 10.00. (318 aa)    
Predicted Functional Partners:
KXB79121.1
SPFH/Band 7/PHB domain protein; KEGG: reh:H16_A2036 1.1e-53 h16_A2036; membrane protease subunits, stomatin/prohibitin homologs; Psort location: Cytoplasmic, score: 8.96.
   
 0.945
ftsH
ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
     
 0.810
KXB78256.1
Endonuclease/exonuclease/phosphatase family protein; KEGG: cne:CNA05370 0.0045 phospholipase C; K01128; Psort location: CytoplasmicMembrane, score: 10.00.
       0.789
KXB79143.1
KEGG: pdn:HMPREF9137_2497 1.4e-140 N-acetylmuramoyl-L-alanine amidase K01448.
 
   0.735
KXB80607.1
Fibronectin type III domain protein; KEGG: hya:HY04AAS1_0906 0.0037 N-acetylmuramoyl-L-alanine amidase K01448.
  
   0.694
secF
Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
    0.662
KXB78258.1
DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
       0.660
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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