Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB78239.1TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 0.0064 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 9.52. (999 aa)    
Predicted Functional Partners:
KXB78240.1
SusD family protein.
 
   
 0.926
KXB75666.1
SusD family protein; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.763
KXB75337.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.713
KXB74043.1
Hypothetical protein; KEGG: pfh:PFHG_04159 6.8e-06 hypothetical protein; K10592 E3 ubiquitin-protein ligase HUWE1; Psort location: OuterMembrane, score: 9.49.
  
  
  0.594
KXB77624.1
Hypothetical protein.
 
   
 0.584
KXB75621.1
Hypothetical protein.
 
 
 
 0.565
KXB75622.1
SusD family protein.
 
   
 0.557
KXB75585.1
SusD family protein.
 
     0.552
KXB80395.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.49.
  
  
  0.537
KXB78241.1
Hypothetical protein.
       0.517
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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