STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78226.1Hypothetical protein; KEGG: hpk:Hprae_1186 2.0e-05 L-serine ammonia-lyase K01752; Psort location: Cytoplasmic, score: 9.97; Belongs to the UPF0597 family. (430 aa)    
Predicted Functional Partners:
KXB80436.1
KEGG: pdn:HMPREF9137_0704 1.0e-73 phosphodiesterase family protein K07095; Psort location: Cytoplasmic, score: 8.96.
  
     0.568
KXB78227.1
Amidohydrolase; KEGG: fba:FIC_01065 2.5e-125 amidohydrolase; K01451 hippurate hydrolase; Psort location: Cytoplasmic, score: 8.96.
       0.477
KXB74208.1
Cytochrome C biogenesis protein transmembrane region; KEGG: bsa:Bacsa_2272 1.0e-213 Protein-disulfide reductase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.472
KXB81957.1
KEGG: pdn:HMPREF9137_1128 1.3e-169 L-serine ammonia-lyase K01752; Psort location: Cytoplasmic, score: 9.26.
 
  
  0.466
KXB78228.1
KEGG: pit:PIN17_A1822 3.4e-144 ftcD; glutamate formimidoyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
     0.406
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.