Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB78187.1Virulence-associated protein E; Psort location: Cytoplasmic, score: 8.96. (427 aa)    
Predicted Functional Partners:
KXB78188.1
Hypothetical protein; KEGG: cow:Calow_0581 0.00028 DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 8.96.
 
     0.715
KXB78900.1
Hypothetical protein.
 
     0.603
KXB78891.1
Site-specific recombinase, phage integrase family; KEGG: apb:SAR116_1748 0.00031 phage integrase; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
  
     0.548
KXB75068.1
Site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
  
     0.495
KXB76316.1
Hypothetical protein; KEGG: ckn:Calkro_1918 3.8e-06 DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 8.96.
 
     0.488
KXB75812.1
Hypothetical protein; KEGG: eel:EUBELI_00676 6.0e-05 DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 8.96.
 
     0.487
KXB77846.1
Hypothetical protein; KEGG: brm:Bmur_2137 2.3e-05 DNA primase; K02316 DNA primase; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.486
KXB75537.1
Relaxase/mobilization nuclease domain protein; KEGG: tin:Tint_2201 4.7e-11 DNA topoisomerase; Psort location: Cytoplasmic, score: 8.96.
  
     0.466
KXB75600.1
Relaxase/mobilization nuclease domain protein; KEGG: tin:Tint_2201 2.3e-09 DNA topoisomerase; Psort location: Cytoplasmic, score: 8.96.
  
     0.441
KXB74319.1
Hypothetical protein; KEGG: sgn:SGRA_3959 0.00020 glycosyl transferase family protein; Psort location: Periplasmic, score: 9.84.
  
     0.439
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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