STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78005.1Hypothetical protein; KEGG: pha:PSHAa0816 0.0011 partitioning protein A K03496; Psort location: Cytoplasmic, score: 8.96. (220 aa)    
Predicted Functional Partners:
KXB78006.1
Hypothetical protein.
       0.738
KXB74390.1
KEGG: cyb:CYB_1515 0.0010 TPR repeat-containing protein kinase; K08884 serine/threonine protein kinase, bacterial.
 
     0.643
KXB80092.1
Hypothetical protein; KEGG: pkn:PKH_011660 0.0030 mannose-6-phosphate isomerase.
  
 
   0.594
KXB77643.1
TonB-dependent receptor; KEGG: mct:MCR_0690 8.2e-07 tbpA; transferrin binding protein A TbpA K16087; Psort location: OuterMembrane, score: 10.00.
  
 
   0.564
KXB74316.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 1.4e-07 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 10.00.
  
 
   0.563
KXB79775.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.558
KXB79148.1
ParB-like protein; KEGG: cti:RALTA_A3100 2.1e-48 parB1; exonuclease involved in chromosome partitioning, parb protein K03497; Psort location: Cytoplasmic, score: 9.97; Belongs to the ParB family.
  
 
 0.558
KXB77532.1
Hypothetical protein; KEGG: rcp:RCAP_rcc00943 4.4e-46 cytosine-N(4)-specific DNA-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.558
KXB74386.1
Immunoglobulin-binding regulator B family protein; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.558
KXB78004.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.556
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.