Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB78028.1Hypothetical protein; KEGG: abm:ABSDF0678 0.0025 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433. (366 aa)    
Predicted Functional Partners:
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
    
 0.926
KXB80100.1
Sporulation and cell division repeat protein; KEGG: bpu:BPUM_1632 5.3e-07 cwlC; N-acetylmuramoyl-L-alanine amidase K01448.
  
    0.769
KXB81389.1
Hypothetical protein.
  
     0.762
KXB74206.1
KEGG: pmz:HMPREF0659_A5436 5.1e-86 biotin--[acetyl-CoA-carboxylase] ligase K03524; Psort location: Cytoplasmic, score: 9.97.
  
 0.761
KXB79957.1
Hypothetical protein.
  
    0.757
KXB74341.1
Hypothetical protein.
  
     0.751
KXB81394.1
KEGG: pit:PIN17_A0657 5.5e-105 ribD; riboflavin biosynthesis protein RibD K11752; Psort location: Cytoplasmic, score: 9.97.
   
   0.746
KXB81961.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.718
KXB82135.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.714
KXB78029.1
Hypothetical protein; KEGG: cco:CCC13826_0805 2.1e-41 3-dehydroquinate dehydratase (3-dehydroquinase; type iidhqase) K07133; Psort location: Cytoplasmic, score: 8.96.
 
     0.712
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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