Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB78038.1Galactokinase; KEGG: pmz:HMPREF0659_A6474 6.6e-180 galK; galactokinase K00849; Psort location: Cytoplasmic, score: 8.96; Belongs to the GHMP kinase family. GalK subfamily. (386 aa)    
Predicted Functional Partners:
KXB78035.1
Putative aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 0.997
KXB79006.1
UDP-glucose 4-epimerase; KEGG: pmz:HMPREF0659_A6741 6.5e-157 galE; UDP-glucose 4-epimerase K01784; Psort location: Cytoplasmic, score: 9.97; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 0.969
KXB79137.1
Oxidoreductase, NAD-binding domain protein; KEGG: zga:zobellia_1339 9.1e-64 NAD(P)-dependent oxidoreductase; Psort location: Periplasmic, score: 9.44.
 
 0.831
KXB78742.1
KEGG: pmz:HMPREF0659_A6062 0. beta galactosidase small chain; K01190 beta-galactosidase.
 
  
 0.755
KXB81943.1
Tetratricopeptide repeat domain protein; KEGG: ccm:Ccan_18230 2.0e-91 PIF1/RRM3 DNA helicase-like protein; Psort location: Cytoplasmic, score: 8.96.
   
 0.735
KXB78292.1
Tetratricopeptide repeat protein; KEGG: apb:SAR116_1534 1.5e-05 hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
   
 0.735
KXB79105.1
Peptidase family M49; KEGG: pmz:HMPREF0659_A6864 7.1e-238 peptidase, M49 family; K01277 dipeptidyl-peptidase III; Psort location: Cytoplasmic, score: 8.96.
   
 0.732
KXB78037.1
Transporter, major facilitator family protein; KEGG: gdj:Gdia_1396 2.8e-09 glucose/galactose transporter K12373; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.696
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.661
KXB78036.1
Hypothetical protein.
       0.535
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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