STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78038.1Galactokinase; KEGG: pmz:HMPREF0659_A6474 6.6e-180 galK; galactokinase K00849; Psort location: Cytoplasmic, score: 8.96; Belongs to the GHMP kinase family. GalK subfamily. (386 aa)    
Predicted Functional Partners:
KXB78035.1
Putative aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 0.994
KXB79006.1
UDP-glucose 4-epimerase; KEGG: pmz:HMPREF0659_A6741 6.5e-157 galE; UDP-glucose 4-epimerase K01784; Psort location: Cytoplasmic, score: 9.97; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 0.973
KXB79137.1
Oxidoreductase, NAD-binding domain protein; KEGG: zga:zobellia_1339 9.1e-64 NAD(P)-dependent oxidoreductase; Psort location: Periplasmic, score: 9.44.
 
 0.857
KXB78742.1
KEGG: pmz:HMPREF0659_A6062 0. beta galactosidase small chain; K01190 beta-galactosidase.
 
  
 0.765
KXB78037.1
Transporter, major facilitator family protein; KEGG: gdj:Gdia_1396 2.8e-09 glucose/galactose transporter K12373; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.745
KXB78036.1
Hypothetical protein.
       0.535
KXB78039.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.49.
       0.510
KXB81973.1
KEGG: pdn:HMPREF9137_1300 1.4e-184 rffG; dTDP-glucose 4,6-dehydratase K01710; Psort location: Cytoplasmic, score: 8.96; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
   
  
 0.484
grpE
Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depend [...]
     
 0.439
KXB82137.1
ROK family protein; KEGG: pdn:HMPREF9137_1347 3.0e-143 putative glucokinase; K00845 glucokinase; Psort location: Cytoplasmic, score: 9.26.
 
  
 0.430
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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