STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78060.1Hypothetical protein; KEGG: bth:BT_3982 6.6e-132 exonuclease V subunit alpha; K01144 exodeoxyribonuclease V. (480 aa)    
Predicted Functional Partners:
KXB78061.1
KEGG: fin:KQS_02220 3.7e-35 nucA; DNA/RNA non-specific endonuclease precursor K01173; Psort location: Extracellular, score: 9.71.
       0.836
KXB74141.1
Putative phage head-tail adaptor; KEGG: pmz:HMPREF0659_A6762 3.8e-287 UvrD/REP helicase; Psort location: Cytoplasmic, score: 9.97; Belongs to the helicase family. UvrD subfamily.
 
   0.754
KXB78062.1
TIGR00659 family protein; KEGG: bqy:MUS_4224 3.2e-29 ywbG; murein hydrolase export regulator; Psort location: CytoplasmicMembrane, score: 10.00.
       0.713
KXB78758.1
Hypothetical protein; KEGG: ccm:Ccan_18630 8.8e-11 riboflavin synthase subunit alpha; Psort location: Cytoplasmic, score: 8.96.
  
     0.613
KXB74394.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.610
KXB79708.1
Hypothetical protein; KEGG: nth:Nther_0809 3.3e-09 LexA repressor; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.576
KXB74142.1
Hypothetical protein; KEGG: sgn:SGRA_1994 0.0017 uvrD; DNA-dependent ATPase I and helicase II K03657; Psort location: Cytoplasmic, score: 8.96.
  
   
 0.572
KXB78066.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.517
KXB78067.1
RNA methyltransferase, RsmD family; KEGG: sgn:SGRA_2919 1.3e-34 rsmD; methyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.512
KXB74334.1
Hypothetical protein; KEGG: fbr:FBFL15_3061 1.2e-11 sfp; putative phosphopantetheinyl transferase; Psort location: Cytoplasmic, score: 8.96.
  
     0.494
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.