STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78085.1acyl-CoA thioester hydrolase, YbgC/YbaW family; KEGG: pdn:HMPREF9137_2063 9.7e-60 acyl-CoA thioester hydrolase; K07107 acyl-CoA thioester hydrolase; Psort location: Cytoplasmic, score: 8.96. (140 aa)    
Predicted Functional Partners:
KXB78087.1
KEGG: axy:AXYL_02359 1.2e-15 acyl carrier domain-containing protein K02078; Psort location: Cytoplasmic, score: 8.96.
 
 0.970
KXB78084.1
Hypothetical protein; KEGG: zga:zobellia_2073 1.3e-18 fabZ2; (3R)-hydroxymyristoyl-ACP dehydratase; Psort location: Cytoplasmic, score: 8.96.
 
     0.950
KXB78083.1
Hypothetical protein; KEGG: gfo:GFO_1666 1.6e-34 lipid A biosynthesis acyltransferase K00680.
 
     0.942
KXB78093.1
KEGG: pdn:HMPREF9137_2071 4.0e-196 glycosyltransferase group 2 family protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.913
acpP-2
Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 0.911
KXB78092.1
KEGG: tfo:BFO_2574 5.6e-16 hypothetical protein; K02372 3R-hydroxymyristoyl ACP dehydrase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.911
KXB78086.1
KEGG: tfo:BFO_1314 1.5e-72 Beta-ketoacyl synthase, C-terminal domain-containing protein; K00647 3-oxoacyl-[acyl-carrier-protein] synthase I; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.910
KXB78090.1
Outer membrane lipoprotein carrier protein LolA; KEGG: cnc:CNE_2c16570 0.00025 acyltransferase.
 
     0.907
KXB78081.1
O-methyltransferase; KEGG: vsa:VSAL_I2107 3.3e-82 O-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
     0.900
KXB78077.1
Putative 3-oxoacyl-[acyl-carrier-protein] reductase; KEGG: pdn:HMPREF9137_2055 9.6e-92 short chain dehydrogenase/reductase family oxidoreductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.898
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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