STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78098.1Acyl carrier family protein; KEGG: abu:Abu_1284 0.00086 dltC; D-alanyl carrier protein; K14188 D-alanine--poly(phosphoribitol) ligase subunit 2. (74 aa)    
Predicted Functional Partners:
KXB78099.1
AMP-binding enzyme; KEGG: gct:GC56T3_2026 3.3e-33 AMP-dependent synthetase and ligase; K12508 feruloyl-CoA synthase; Psort location: Cytoplasmic, score: 9.97.
       0.849
KXB78097.1
Acyltransferase; KEGG: zga:zobellia_2054 6.7e-139 exporter / acyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.721
KXB78087.1
KEGG: axy:AXYL_02359 1.2e-15 acyl carrier domain-containing protein K02078; Psort location: Cytoplasmic, score: 8.96.
    
  0.676
acpP-2
Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
  0.645
KXB78096.1
Hypothetical protein; KEGG: rba:RB10144 4.1e-29 endo-1,4-beta-xylanase B.
       0.435
KXB78090.1
Outer membrane lipoprotein carrier protein LolA; KEGG: cnc:CNE_2c16570 0.00025 acyltransferase.
       0.433
KXB78091.1
Hypothetical protein.
       0.433
KXB78093.1
KEGG: pdn:HMPREF9137_2071 4.0e-196 glycosyltransferase group 2 family protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.433
KXB78092.1
KEGG: tfo:BFO_2574 5.6e-16 hypothetical protein; K02372 3R-hydroxymyristoyl ACP dehydrase; Psort location: Cytoplasmic, score: 8.96.
       0.410
KXB78088.1
Beta-ketoacyl synthase protein; KEGG: wvi:Weevi_1565 1.2e-95 beta-ketoacyl-acyl-carrier-protein synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.400
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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