Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB78119.1KEGG: gfo:GFO_0239 1.2e-43 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase K01238. (319 aa)    
Predicted Functional Partners:
KXB78118.1
Hypothetical protein; KEGG: pmz:HMPREF0659_A5890 3.0e-26 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.
       0.655
KXB79941.1
Signal peptide protein, YSIRK family; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.632
KXB77460.1
Hypothetical protein.
  
     0.456
KXB78568.1
S4 domain protein; KEGG: mct:MCR_0729 7.4e-14 heat shock protein 15 K04762; Psort location: Cytoplasmic, score: 9.97.
  
     0.437
KXB77476.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.429
KXB78138.1
Rod shape-determining protein MreD; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.414
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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