STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78125.1FHA domain protein; KEGG: liv:LIV_0299 0.0055 hypothetical protein; K06193 phosphonoacetate hydrolase; Psort location: Cytoplasmic, score: 8.96. (179 aa)    
Predicted Functional Partners:
KXB81738.1
Hypothetical protein; KEGG: pmz:HMPREF0659_A5050 2.1e-103 hypothetical protein; K08884 serine/threonine protein kinase, bacterial; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.885
KXB78047.1
KEGG: rai:RA0C_1856 1.1e-17 pasta domain containing protein; K08884 serine/threonine protein kinase, bacterial; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.852
KXB78292.1
Tetratricopeptide repeat protein; KEGG: apb:SAR116_1534 1.5e-05 hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 0.799
KXB78124.1
Sporulation and cell division repeat protein; Psort location: Cytoplasmic, score: 8.96.
       0.788
KXB78123.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
       0.661
KXB78122.1
Hypothetical protein; KEGG: ste:STER_1002 0.0046 arsenate reductase; K00537 arsenate reductase.
       0.618
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 0.584
KXB81943.1
Tetratricopeptide repeat domain protein; KEGG: ccm:Ccan_18230 2.0e-91 PIF1/RRM3 DNA helicase-like protein; Psort location: Cytoplasmic, score: 8.96.
  
 0.471
KXB78436.1
Putative serine protease MucD; KEGG: pdn:HMPREF9137_1111 7.3e-213 peptidase Do; Psort location: Periplasmic, score: 10.00.
    
  0.457
KXB79105.1
Peptidase family M49; KEGG: pmz:HMPREF0659_A6864 7.1e-238 peptidase, M49 family; K01277 dipeptidyl-peptidase III; Psort location: Cytoplasmic, score: 8.96.
  
 0.456
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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