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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78140.1Cell cycle protein, FtsW/RodA/SpoVE family; KEGG: ols:Olsu_1757 2.9e-21 peptidoglycan glycosyltransferase K05364; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family. (501 aa)    
Predicted Functional Partners:
KXB78139.1
Putative penicillin-binding protein 2; KEGG: bsa:Bacsa_1389 4.0e-212 peptidoglycan glycosyltransferase K05515; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.989
KXB78136.1
KEGG: apb:SAR116_0710 6.7e-68 cell shape determining protein MreB/Mrl K03569; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.961
KXB78137.1
KEGG: apb:SAR116_0709 0.00031 cell shape-determining protein K03570.
 
  
 0.923
KXB77444.1
KEGG: pdn:HMPREF9137_0791 0. penicillin-binding protein, transpeptidase domain-containing protein; K03587 cell division protein FtsI (penicillin-binding protein 3); Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.906
KXB77451.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.878
KXB78138.1
Rod shape-determining protein MreD; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.851
KXB77450.1
Putative UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
  
 0.791
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
  
 0.757
KXB78135.1
MGS-like domain protein; KEGG: pdn:HMPREF9137_2093 6.7e-84 MGS-like domain-containing protein; K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase.
       0.748
KXB79016.1
Hypothetical protein.
  
 
 0.718
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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