STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78157.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (306 aa)    
Predicted Functional Partners:
KXB78156.1
Hypothetical protein; KEGG: apb:SAR116_1299 5.3e-107 endonuclease.
 
  
 0.968
KXB78158.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.956
KXB78155.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.952
KXB78154.1
DNA (cytosine-5-)-methyltransferase; KEGG: ccm:Ccan_00330 7.7e-186 MHphi(C) K00558; Psort location: Cytoplasmic, score: 8.96; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
 
     0.877
KXB78153.1
Hypothetical protein.
       0.517
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.