Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB78158.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (705 aa)    
Predicted Functional Partners:
KXB78156.1
Hypothetical protein; KEGG: apb:SAR116_1299 5.3e-107 endonuclease.
 
 
 
 0.951
KXB78157.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.947
KXB78155.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.944
KXB78154.1
DNA (cytosine-5-)-methyltransferase; KEGG: ccm:Ccan_00330 7.7e-186 MHphi(C) K00558; Psort location: Cytoplasmic, score: 8.96; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
 
   
 0.854
KXB77397.1
Hypothetical protein; KEGG: efc:EFAU004_01897 0.00078 IS1380 family transposase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.775
KXB76963.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.775
KXB76235.1
KEGG: pmz:HMPREF0659_A6144 0. DNA gyrase/topoisomerase IV, A subunit; K02621 topoisomerase IV subunit A; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.775
KXB75442.1
Transposase, IS4 family; KEGG: efc:EFAU004_01897 0.0036 IS1380 family transposase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.775
KXB75028.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.775
KXB74966.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.775
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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