Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB77866.1Hypothetical protein; KEGG: mif:Metin_0376 0.0027 alpha-L-glutamate ligase, RimK family; K15740 tetrahydromethanopterin:alpha-L-glutamate ligase; Psort location: Cytoplasmic, score: 8.96. (330 aa)    
Predicted Functional Partners:
KXB77868.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.953
KXB77872.1
ABC transporter, ATP-binding protein; KEGG: osp:Odosp_0903 4.6e-211 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.839
KXB77867.1
Hypothetical protein.
       0.773
KXB77869.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB77856.1
ABC transporter transmembrane region; KEGG: fte:Fluta_4016 5.4e-130 peptide-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.639
rplW
Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.
    
   0.637
KXB74461.1
ABC transporter transmembrane region; KEGG: osp:Odosp_0369 2.0e-265 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.634
KXB81591.1
ABC transporter, ATP-binding protein; KEGG: osp:Odosp_0369 0. Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.627
KXB79387.1
Peptidase, C39 family; KEGG: osp:Odosp_0369 5.0e-143 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.623
KXB75692.1
Hypothetical protein; KEGG: osp:Odosp_0369 3.3e-50 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.610
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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