STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB77856.1ABC transporter transmembrane region; KEGG: fte:Fluta_4016 5.4e-130 peptide-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 9.99. (563 aa)    
Predicted Functional Partners:
KXB77855.1
ABC transporter, ATP-binding protein; KEGG: osp:Odosp_0369 1.2e-45 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 7.88.
     0.981
KXB76925.1
ABC transporter, ATP-binding protein; KEGG: osp:Odosp_0369 1.7e-69 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.970
KXB74433.1
ABC transporter, ATP-binding protein; KEGG: osp:Odosp_0369 1.6e-59 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.969
KXB77857.1
Radical SAM domain protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.814
KXB77868.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.717
KXB77854.1
Hypothetical protein.
       0.664
KXB77866.1
Hypothetical protein; KEGG: mif:Metin_0376 0.0027 alpha-L-glutamate ligase, RimK family; K15740 tetrahydromethanopterin:alpha-L-glutamate ligase; Psort location: Cytoplasmic, score: 8.96.
 
     0.640
KXB77858.1
Hypothetical protein.
       0.578
KXB74434.1
Hypothetical protein.
  
  0.566
KXB81592.1
Hypothetical protein.
  
  0.553
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.