Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dacATIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (254 aa)    
Predicted Functional Partners:
KXB77819.1
Dihydropteroate synthase; KEGG: pdn:HMPREF9137_0315 1.5e-102 folP; dihydropteroate synthase K00796; Psort location: Cytoplasmic, score: 9.97.
       0.820
KXB79014.1
Phosphoglucosamine mutase; KEGG: pmz:HMPREF0659_A5955 4.0e-205 glmM; phosphoglucosamine mutase K01840; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.775
KXB75989.1
Putative phosphoglucomutase; KEGG: pdn:HMPREF9137_2410 2.2e-266 pgcA; phosphoglucomutase; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.775
KXB77817.1
KEGG: pmz:HMPREF0659_A6214 2.3e-152 pta; phosphate acetyltransferase K00625; Psort location: Cytoplasmic, score: 9.97.
       0.664
KXB78563.1
Hypothetical protein.
 
  
 0.607
mutS2
MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
 
     0.584
KXB81369.1
7TM receptor with intracellular HD hydrolase; KEGG: bmq:BMQ_4552 2.0e-59 metal-dependent phosphohydrolase K07037; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.557
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.540
nnrD
YjeF domain protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]
 
     0.446
KXB77820.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.414
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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