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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB77820.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (300 aa)    
Predicted Functional Partners:
KXB77821.1
Hypothetical protein.
       0.416
KXB77822.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
       0.416
KXB77823.1
Site-specific recombinase, phage integrase family; KEGG: apb:SAR116_1915 3.3e-05 tyrosine recombinase XerD K04763; Psort location: Cytoplasmic, score: 8.96.
       0.416
dacA
TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
       0.414
KXB77819.1
Dihydropteroate synthase; KEGG: pdn:HMPREF9137_0315 1.5e-102 folP; dihydropteroate synthase K00796; Psort location: Cytoplasmic, score: 9.97.
       0.414
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.