STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB77822.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family. (267 aa)    
Predicted Functional Partners:
KXB77823.1
Site-specific recombinase, phage integrase family; KEGG: apb:SAR116_1915 3.3e-05 tyrosine recombinase XerD K04763; Psort location: Cytoplasmic, score: 8.96.
     0.904
KXB77821.1
Hypothetical protein.
       0.773
KXB75248.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.771
KXB74541.1
Hypothetical protein; KEGG: apb:SAR116_1748 3.1e-06 phage integrase.
 
     0.697
KXB78896.1
Relaxase/mobilization nuclease domain protein; KEGG: tin:Tint_2201 2.5e-20 DNA topoisomerase; Psort location: Cytoplasmic, score: 8.96.
  
     0.546
KXB78897.1
Bacterial mobilization protein MobC.
  
     0.498
KXB75127.1
Site-specific recombinase, phage integrase family; KEGG: apb:SAR116_1915 0.0020 tyrosine recombinase XerD K04763; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
  
     0.467
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
    
  0.465
KXB79701.1
DNA binding domain, excisionase family.
  
     0.455
KXB77846.1
Hypothetical protein; KEGG: brm:Bmur_2137 2.3e-05 DNA primase; K02316 DNA primase; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.446
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.