STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB77785.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (328 aa)    
Predicted Functional Partners:
KXB74211.1
Hypothetical protein; KEGG: dmu:Desmu_1037 0.0084 peptidase S26B, signal peptidase; K13280 signal peptidase, endoplasmic reticulum-type; Psort location: Cytoplasmic, score: 8.96.
 
     0.791
KXB74210.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.788
KXB74212.1
Hypothetical protein.
 
     0.773
KXB77794.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.756
KXB78743.1
OmpA family protein; Psort location: OuterMembrane, score: 9.93.
  
     0.743
KXB77617.1
P-loop domain protein, KAP family; KEGG: cbk:CLL_A3035 0.00012 endopeptidase O; K07386 putative endopeptidase; Psort location: Cytoplasmic, score: 8.96.
  
     0.722
KXB75690.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.710
KXB78740.1
Hypothetical protein; KEGG: pmh:P9215_00001 0.0050 dnaN; DNA polymerase III subunit beta K02338; Psort location: OuterMembrane, score: 9.52.
  
     0.705
KXB78243.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.96.
  
     0.698
KXB81222.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52.
  
     0.687
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.