Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB77786.1ATP-grasp domain protein; KEGG: pmz:HMPREF0659_A5893 4.6e-101 ATP-grasp domain protein; K01955 carbamoyl-phosphate synthase large subunit; Psort location: Cytoplasmic, score: 8.96. (311 aa)    
Predicted Functional Partners:
carA
KEGG: pmz:HMPREF0659_A5880 6.6e-180 carA; carbamoyl-phosphate synthase, small subunit K01956; Psort location: Cytoplasmic, score: 9.26; Belongs to the CarA family.
  
 0.990
pyrB
KEGG: pdn:HMPREF9137_2308 4.1e-148 pyrB; aspartate carbamoyltransferase K00609; Psort location: Cytoplasmic, score: 9.97; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.980
pyrI
Aspartate carbamoyltransferase, regulatory subunit; Involved in allosteric regulation of aspartate carbamoyltransferase.
  
 
 0.962
KXB81937.1
KEGG: pmz:HMPREF0659_A5881 9.8e-273 class II glutamine amidotransferase; K00764 amidophosphoribosyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.932
glmS
Glutamine-fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
   
 0.886
pyrD
Dihydroorotate dehydrogenase 1B; Catalyzes the conversion of dihydroorotate to orotate.
  
 0.875
KXB74129.1
Glutamate synthase; KEGG: pit:PIN17_A1472 3.4e-238 gltA; glutamate synthase (NADPH), homotetrameric K00266; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.857
KXB79592.1
Glutamate--ammonia ligase, catalytic domain protein; KEGG: pdn:HMPREF9137_1467 1.7e-206 putative glutamine synthetase, beta-grasp domain-containing protein; K01915 glutamine synthetase; Psort location: Cytoplasmic, score: 9.97.
  
 0.853
KXB81939.1
KEGG: pdn:HMPREF9137_1362 0. carB; carbamoyl-phosphate synthase large subunit K01955; Psort location: Cytoplasmic, score: 9.97.
     
  0.840
KXB75587.1
Glutamate--ammonia ligase, catalytic domain protein; KEGG: pdn:HMPREF9137_0797 0. glutamine synthetase; K01915 glutamine synthetase; Psort location: Cytoplasmic, score: 9.97.
    
  0.837
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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