STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB77800.1Chain length determinant protein; KEGG: bsa:Bacsa_0238 4.6e-156 capsular exopolysaccharide family protein; Psort location: CytoplasmicMembrane, score: 9.82. (832 aa)    
Predicted Functional Partners:
KXB81935.1
Polysaccharide biosynthesis/export protein.
 
 0.999
KXB78018.1
Respiratory-chain NADH dehydrogenase, subunit; KEGG: pdn:HMPREF9137_1116 8.1e-246 hypothetical protein; K13378 NADH-quinone oxidoreductase subunit C/D; Psort location: Cytoplasmic, score: 9.12.
     
 0.969
KXB77788.1
KEGG: pmz:HMPREF0659_A5895 3.3e-75 bacterial sugar transferase; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
 0.967
KXB78766.1
Putative epimerase/dehydratase WbiI; KEGG: ccm:Ccan_23400 9.9e-122 capsular polysaccharide biosynthesis protein capD; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.924
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
    
 0.922
nuoB
NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
     
 0.895
KXB77799.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.893
KXB77801.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
     
 0.799
KXB77792.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.798
KXB79115.1
Hypothetical protein.
  
 
 0.767
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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