STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB77771.1KEGG: pdn:HMPREF9137_0542 1.5e-164 2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Psort location: Cytoplasmic, score: 8.96. (335 aa)    
Predicted Functional Partners:
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
  
 0.999
KXB77772.1
KEGG: pdn:HMPREF9137_0543 0. 2-oxoacid:acceptor oxidoreductase subunit alpha; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Psort location: Cytoplasmic, score: 8.96.
 
 0.999
KXB79159.1
KEGG: pmz:HMPREF0659_A5966 4.4e-167 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) K00174; Psort location: Cytoplasmic, score: 8.96.
 
 0.971
KXB79157.1
KEGG: pmz:HMPREF0659_A5964 1.0e-78 2-oxoacid:ferredoxin/flavodoxin oxidoreductase, gamma subunit; K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma.
 
 0.947
KXB74137.1
Malic enzyme, NAD binding domain protein; KEGG: pmz:HMPREF0659_A6863 1.2e-187 malate dehydrogenase (oxaloacetate-decarboxylating) K00029; Psort location: Cytoplasmic, score: 9.97.
   
 0.785
KXB79160.1
KEGG: pmz:HMPREF0659_A5967 7.2e-32 4Fe-4S binding domain protein; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta.
  
 0.784
KXB79158.1
Thiamine pyrophosphate enzyme, TPP binding domain protein; KEGG: pdn:HMPREF9137_1431 1.5e-118 thiamine pyrophosphate protein; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta.
  
  
 
0.708
KXB79506.1
Pyruvate kinase; KEGG: pdn:HMPREF9137_0096 1.9e-189 pyk; pyruvate kinase K00873; Psort location: Cytoplasmic, score: 9.97.
   
 0.707
sucD
succinate-CoA ligase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
  
 
 0.687
sucC
succinate-CoA ligase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
  
 
 0.681
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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