STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB77712.1Hypothetical protein; KEGG: edi:EDI_024060 3.6e-28 trichohyalin K13173; Psort location: Cytoplasmic, score: 9.26. (281 aa)    
Predicted Functional Partners:
KXB77711.1
Hypothetical protein; KEGG: aai:AARI_02060 5.2e-06 peptidase M23.
      
0.773
KXB77713.1
Hypothetical protein; KEGG: edi:EDI_255270 5.3e-14 neurofilament medium polypeptide; Psort location: Cytoplasmic, score: 9.26.
      
0.605
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
  0.523
KXB80133.1
Hypothetical protein.
  
   0.483
KXB80134.1
Hypothetical protein.
  
   0.483
KXB79973.1
Hypothetical protein; KEGG: pfe:PSF113_4166 0.0090 exbD; protein ExbD/TolR K03559.
  
   0.483
KXB79974.1
Hypothetical protein.
  
   0.483
KXB74188.1
KEGG: chu:CHU_1079 6.6e-235 clpA; ATP-dependent Clp protease, ATP-binding subunit K03696; Psort location: Cytoplasmic, score: 9.97; Belongs to the ClpA/ClpB family.
  
 
   0.423
rplD
50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.
  
    0.410
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.