STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB77641.1Hypothetical protein; KEGG: zin:ZICARI_156 0.00066 tilS; putative tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase; Psort location: OuterMembrane, score: 9.49. (1480 aa)    
Predicted Functional Partners:
KXB80092.1
Hypothetical protein; KEGG: pkn:PKH_011660 0.0030 mannose-6-phosphate isomerase.
  
     0.762
KXB74293.1
Outer membrane protein, OMP85 family.
 
   
 0.762
KXB75734.1
OstA-like protein.
  
   
 0.757
KXB74121.1
Hypothetical protein.
  
     0.753
KXB74218.1
Hypothetical protein.
  
     0.749
KXB80600.1
Hypothetical protein; KEGG: pyo:PY00139 0.00064 erythrocyte membrane protein; K09561 STIP1 homology and U-box containing protein 1; Psort location: OuterMembrane, score: 9.49.
  
     0.746
KXB74186.1
Hypothetical protein.
  
     0.744
KXB77451.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.742
KXB78297.1
Hypothetical protein.
  
     0.738
KXB76000.1
Tetratricopeptide repeat protein.
  
     0.736
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.